80-102: Freshman Seminar on
Causal DiscoveryFall 1999
http://www.andrew.cmu.edu/course/80-102/
Professor: Richard Scheines
Office: Baker Hall 135-E
Phone: 268-8571
Email: scheines@andrew.cmu.edu
Office Hours: By appointment: 1 - 6 P.M. daily
Class Meetings:
How do we know, or think we know, that smoking causes lung cancer? How do we know, or think we know, that even small amounts of lead can cause damage to a child's brain? How can we scientifically investigate whether tougher prison sentences really reduce crime? This course is about the science of reasoning with and establishing causal claims of this sort, especially where they involve statistical data. Although quite alot is now known about causal reasoning, the great bulk of it has been discovered only in the last 15 years. Unfortunately, there are virtually no textbooks or reasonable readings for undergraduates on this topic. As a result, several colleagues and I are striving to develop a web-based textbook that includes hands-on interactive modules, simulated causal systems and simulated laboratories, and in this course we will use the first version of it. All of the concepts will be taught qualitatively, and no statistics background is required.
Starting Sept. 1st, you will do lessons on the web almost every week. On Wednesdays we will meet in a computer cluster (Baker 140-C) and I will help as you work through some of the web-based material. We will gather on Monday to discuss the lessons, work through any questions you have on content, and systematically critique the utility of the web-based material as instructional devices. Over 20 universities in several countries are committed to use this material, and you will helping to develop it.
You will be graded on performance in three areas:
50% : Class attendance and participation
30% : Completing web-based exercises
20% : 4 Quizes & Regular homework assignments
Quizes will be short and relatively easy, and announced at least a week in advance. There will be no final exam and no final paper.
Week 1
Class |
Topic |
Assignment Due |
Monday, Aug. 23rd: Baker 150 |
Introduction to Class |
None |
Wednesday, Aug. 25th: Baker 150 |
Overview of the Topic |
Assignment 1 (see below) |
Week 2
Class |
Topic |
Assignment Due |
Monday, Aug. 30th: 10:30 A.M.Hunt Library: Library Instruction Center |
Introduction to the Library |
|
Wednesday, Sept. 1st: Baker 150 (10:30 A.M.) |
|
Week 3
Class |
Topic |
Assignment Due |
Monday, Sept. 6: No class : Labor Day |
- |
- |
Wednesday, Sept. 8th: Baker 150 (10:30 A.M.) |
Web-based Courseware, Module 1: Causality |
Week 4
Class |
Topic |
Assignment Due |
Monday, Sept. 13: Baker 150 (6:30 P.M.) |
Discuss Module 1 |
Module 1: Causation In Individuals |
Wednesday, Sept. 15: Baker 140C (10:30 A.M.) |
Computer Lab |
Week 5
Class |
Topic |
Assignment Due |
Monday, Sept. 20: Baker 150 (6:30 P.M.) |
Discuss Modules 2 & 3 |
Module 2: Causation In Populations Module 3: Determinism & Indeterminism |
Wednesday, Sept. 22: Baker 140C (10:30 A.M.) |
Computer Lab |
None |
Week 6
Class |
Topic |
Assignment Due |
Monday, Sept. 27: Baker 150 (6:30 P.M.) |
Discuss Mods 4 & 5 |
Module 4: Representing Causation Qualitatively: Causal GraphsModule 5: Interventions, Manipulations, and Randomization |
Wednesday, Sept. 29: Baker 140C (10:30 A.M.) |
Computer Lab |
Module 6: What is Causal Discovery: Representing vs. Discovering Causation |
Week 7
Class |
Topic |
Assignment Due |
Monday, Oct 4th: Baker 150 (6:30 P.M.) |
Discuss Mods 7, 8 |
Module 7: Relative FrequencyModule 8: Conditional Relative Frequency |
Wednesday, Oct 6th : Baker 140C (10:30 A.M.) |
Computer Lab |
None |
Week 8
Class |
Topic |
Assignment Due |
Monday, Oct 11th: No Class: Mid-semester break |
- |
- |
Wednesday, Oct 13th: Baker 140C (10:30 A.M.) |
Computer Lab |
Module 9: Quantitative Bayesian Networks |
Week 9
Class |
Topic |
Assignment Due |
Monday, Oct 18th: Baker 150 (6:30 P.M.) |
Discuss Mods 9, 10, & 11 |
Module 10: IndependenceModule 11: Conditional Independence |
Wednesday, Oct 20th: Baker 140C (10:30 A.M.) |
Computer Lab |
None |
Week 10
Class |
Topic |
Assignment Due |
Monday, Oct 25th: Baker 150 (6:30 P.M.) |
Discuss Module 12 |
Module 12: D-Separation |
Wednesday, Oct 27th: Baker 140C (10:30 A.M.) |
Computer Lab |
None |
Week 11
Class |
Topic |
Assignment Due |
Monday, Nov. 1st: Baker 150 (6:30 P.M.) |
Discuss Mods 13 & 14 |
Module 13: Correlation Module 14: Chi-square |
Wednesday, Nov. 3rd: Baker 140C (10:30 A.M.) |
Computer Lab |
None |
Week 12
Class |
Topic |
Assignment Due |
Monday, Nov. 8st: Baker 150 (6:30 P.M.) |
Discuss Mods 15,16, & 17 |
Module 15: Indistinguishable Alternatives Module 16: Confounding Module 17: Sample Selection Bias |
Wednesday, Nov. 10th : Baker 140C (10:30 A.M.) |
Computer Lab |
None |
Week 13
Class |
Topic |
Assignment Due |
Monday, Nov. 15st: Baker 150 |
Discuss Module 18 |
Module 18: Experimental Control |
Wednesday, Nov. 17th : Baker 140C (10:30 A.M.) |
Computer Lab |
None |
Week 14
Class |
Topic |
Assignment Due |
Monday, Nov. 22nd : Baker 150 (6:30 P.M.) |
Discuss Module 19 |
Module 19: Statistical Control |
Wednesday, Nov. 24th : No class - Thanksgiving |
- |
- |
Week 15
Class |
Topic |
Assignment Due |
Monday, Nov. 29th: Baker 150 (6:30 P.M.) |
Discuss Module 20 |
Module 20: Statistical Issues |
Wednesday, Dec. 1st : Baker 150 (10:30 A.M.) |
Summing Up |
None |
Assignment 1: Due Wednesday, August 25th: Find two current event stories involving "studies" about a causal claim. You may use a current newspaper (e.g. the Pgh Post-Gazette or the NY Times), or a news magazine (e.g., Time, Newsweek, U.S. News and World Report, etc.). For each story, write a sentence or two summarizing the causal claim, and a short paragraph describing the evidence for the claim. Turn in your assignment on a typed sheet, and make sure to include your name.
Assignment 2: Due Monday, August 30th: Describe two causal questions of societal importance that you would like to learn more about. For example, you might be curious as to whether the prevalence of violent movies and/or computer games really causes more violence in society. In a short paragraph, describe each question and your hypothesis about the truth of the matter. Again, turn in your assignment at the beginning of class on a typed sheet, and make sure to include your name.
Assignment 3: Due Wednesday, Sept. 1: Take each of the causal questions that you identified in assignment 2, and use the library, and in particular the skills for searching online databases you learned at Hunt Library, to identify 5 sources on each question that you might pursue to learn more about research that has already been conducted on each question. Give the full citation for each source. If there is an abstract, summarize it in a sentence or two.
Assignment 4: Due Wednesday, Sept. 8th: Get the text for the sources you cited in assignment 3, and read each. Take the best source for one of the questions (the one that has the clearest claims and connection with measured data) and do the following. 1) Identify all the causal claims and questions that occur in the piece. 2) Identify the causal variables involved in these claims, and the values that these variables plausibly range over. 3) Identify the measured variables actually used. Turn in the source along with your typed up answer.
The Asymmetry of Causation
Ehring, D. (1982) "Causal Asymmetry," Journal of Philosophy 79, 761-64
Hausman, D. (1984). "Causal priority." Nous 18, 261-279.
Papineau, D. (1985) "Causal Asymmetry," British Journal for Philosophy of Science, 36, 273-89.
Papineau, D. (1985) "Can we Reduce Causal Direction to Probabilities?," PSA 1992, vol. 2, 238-52.
Simon, H. (1953). Causal ordering and identifiability. Studies in Econometric Methods. Hood and Koopmans (eds). 49-74.Wiley, NY.
Causation and Events
Davidson, D. (1980). Essays on Actions, Reasons and Causes, Oxford
Kim, J. (1971). "Causes and Events: Mackie on Causation" reprinted in E. Sosa, Causation and Conditionals (Oxford, 1975).
Kim, J. (1973). "Causation, Nomic Subsumption and the Concept of Event," Journal of Philosophy 70, 217-36.
Causation and Counterfactuals
Kim, J. (1973). "Causes and Counterfactuals," J. of Phil., 70, reprinted in Sosa, Causation and Conditionals.
Lewis, D. (1973a). Counterfactuals. Harvard University Press, Cambridge, MA.
Lewis, D. (1973b). Causation. Journal of Philosophy 70, 556-572.
Stalnaker, R. "A Theory of Conditionals," in N. Rescher, ed. Studies in Logical Theory, reprinted in E. Sosa, Causation and Conditionals (Oxford, 1975).
Causation in the Social Sciences
Bollen, Kenneth A. (1989). Structural Equations with Latent Variables. Wiley, 1989
Blalock, H. (Ed.) (1971). Causal Models in the Social Sciences. Aldine-Atherton, Chicago.
Granger, C. (1969). Investigating causal relations by econometric models and cross-spectral methods. Econometrica 37, 424-438.
Heise, D. (1975). Causal Analysis. Wiley, New York
Kenny, D. (1979). Correlation and Causality. Wiley, New York.
Simon, H. (1954).Spurious correlation: a causal interpretation. JASA. 49, 467-479.
Wright, S. (1934). The method of path coefficients. Ann. Math. Stat. 5, 161-215.
Regularity Theories of Causation
Ducass, C.J. "On the Nature and Observability of the Causal Relation," Journal of Philosophy 23, reprinted in E. Sosa, ed., Causation and Conditionals
David Hume, An Inquiry Concerning Human Understanding, Hackett
Mackie, J. (1974). The Cement of the Universe. Oxford University Press, New York.
Probability and Causation
Cartwright, N. (1983). How the Laws of Physics Lie. Oxford University Press, New York
Cartwright, N. (1989). Nature's Capacities and Their Measurement. Clarendon Press, Oxford.
Davis, W. (1988). Probabilistic theories of causation. Probability and Causality, James Fetzer (ed.). D. Reidel, Dordrecht
Elby, A. (1992) Should we explain the EPR causally? Philosophy of Science 59, 16-25.
Meek, C., and Glymour, C. (1994). "Conditioning and intervening," British Journal for the Philosophy of Science.
Pearl, Judea, and Thomas Verma (1993). "A Theory of Inferred Causation." Principles of Knowledge Representation and Reasoning: Proceeding of the Second International Conference, J.A. Allen, R. Fikes, and E. Sandewall, eds. Morgan Kaufmann, San Mateo, CA, pp. 441-452.
Reichenbach, H. (1956). The Direction of Time. Univ. of California Press, Berkeley, CA.
Salmon, W. (1980). Probabilistic causality. Pacific Philosophical Quarterly 61, 50-74.
Shafer, Glenn (1995). The Art of Causal Conjecture. MIT Press.
Suppes, P. (1970). A Probabilistic Theory of Causality. North-Holland, Amsterdam.
Causation and Explanation
Hempel, C. (1965). Aspects of Scientific Explanation, Free Press, (sections 1,2, and 4).
Humphreys, P. (1989). The Chances of Explanation. Princeton Univ. Press.
Kitcher, P. (1989). "Explanatory Unification and the Causal Structure of the World" in P. Kitcher and W. Salmon, eds. Minnesota Studies in the Philosophy of Science. vol 13. Scientific Explanation. University of Minnesota Press pp. 410-505.
Salmon, Wesley C. (1984). Scientific Explanation and the Causal Structure of the World. Princeton University Press.
Sanford, D. (1976). "The Direction of Causation and the Direction of Conditionship," Journal of Philosophy, 73: 193-207.
Inferring Causal Structure from Statistical Data
Cooper, G., & Herskovits, E. (1992). A Bayesian method for the induction of probabilistic networks from data. Machine Learning, 9, 308-347.
Holland, P. (1986). Statistics and causal inference. JASA 81, 945-960.
Pearl, J. (1988). Probabilistic Reasoning in Intelligent Systems. Morgan and Kaufman, San Mateo
Robins, James (1987). "A Graphical Approach to the Identification and Estimation of Causal Parameters in Mortality Studies with Sustained Exposure Periods." Journal of Chronic Diseases 40, Supplement 2 139S-161S.
Scheines, R. (1996). "An Introduction to Causal Inference," in Causality in Crisis?, ed. V. Mckim and S. Turner (eds.), Univ. of Notre Dame Press.
Spirtes, Peter, Clark Glymour, and Richard Scheines (1993). Causation, Prediction, and Search. Springer-Verlag Lecture Notes in Statistics, No. 81.
Spirtes, P., Meek, C., and Richardson, T. (1995). Causal inference in the presence of latent variables and selection bias, in Proceedings of the Eleventh Conference on Uncertainty in Artificial Intelligence, ed P. Besnard and S. Hanks, Morgan Kaufmann Publishers, Inc., San Mateo, pp 499-506.
Causation, Randomization, and Experimentation
Fisher, R. (1951). The Design of Experiments. Oliver and Boyd, Edinburgh.
Kadane, J. and Seidenfeld, T. (1992). Statistical issues in the analysis of data gathered in the new designs. Toward a More Ethical Clinical Trial, J. Kadane (ed.), John Wiley & Sons, NY, forthcoming.
Rubin, D. (1978). Bayesian inference for causal effects: The role of randomizations. Ann. Stat. 6, 34-58.
Rubin, D. (1974). Estimating causal effects of treatments in randomized and nonrandomized studies. Journal of Educational Psychology 66, 688-701.
Spirtes, Peter, Clark Glymour, and Richard Scheines (1993). Causation, Prediction, and Search. Springer-Verlag Lecture Notes in Statistics, No. 81. (chapter 8)
Causation and Manipulation
Gasking, D. (1955). "Causation and Recipes," Mind, 64, reprinted in M. Brand, ed. The Nature of Causation (Urbana, 1976).
Hausman, D. (1986) "Causation and Experimentation," American Philosophical Quarterly, 23, 143-154.
Kelly, K. (1996). The Logic of Reliable Inquiry. Oxford University Press (chapter 14).
Spirtes, P., Glymour, C., and Scheines, R. (1994) "Inference, Intervention, and Prediction", in Selecting Models from Data: Artificial Intelligence and Statistics IV, ed. by P. Cheesman and R. Oldford, Springer Verlag, Lecture Notes in Statistics 89, pp. 215-223.
von Wright, G.H. (1975) Causality and Determinism, Columbia Univ. Press.